R-ape-5.7.1-6.fc40 | Build Info | ISCAS openkoji system

Information for build R-ape-5.7.1-6.fc40

14024

Package Name

Links

Fedora Package Sources | Fedora Official Koji Buildsystem | Rocks RISC-V Koji Buildsystem | Fedora RISC-V GitHub | Old Koji Buildsystem

Version

5.7.1

Release

6.fc40

Epoch

Draft

False

Source

git+https://src.fedoraproject.org/rpms/R-ape.git#8cdce00a23c31aa339554cc316451aaebc9ae7f5

Summary

Analyses of Phylogenetics and Evolution

Description

Functions for reading, writing, plotting, and manipulating phylogenetic trees, analyses of comparative data in a phylogenetic framework, ancestral character analyses, analyses of diversification and macroevolution, computing distances from DNA sequences, reading and writing nucleotide sequences as well as importing from BioConductor, and several tools such as Mantel's test, generalized skyline plots, graphical exploration of phylogenetic data (alex, trex, kronoviz), estimation of absolute evolutionary rates and clock-like trees using mean path lengths and penalized likelihood, dating trees with non-contemporaneous sequences, translating DNA into AA sequences, and assessing sequence alignments. Phylogeny estimation can be done with the NJ, BIONJ, ME, MVR, SDM, and triangle methods, and several methods handling incomplete distance matrices (NJ*, BIONJ*, MVR*, and the corresponding triangle method). Some functions call external applications (PhyML, Clustal, T-Coffee, Muscle) whose results are returned into R.

Built by

kojiadmin

State

complete

Volume

DEFAULT

Started

Fri, 03 May 2024 14:23:48 CST

Completed

Fri, 03 May 2024 16:11:34 CST

Task

build (f40, /rpms/R-ape.git:8cdce00a23c31aa339554cc316451aaebc9ae7f5)

Extra

{'source': {'original_url': 'git+https://src.fedoraproject.org/rpms/R-ape.git#8cdce00a23c31aa339554cc316451aaebc9ae7f5'}}

Tags

f40

RPMs

src
	R-ape-5.7.1-6.fc40.src.rpm (info) (download)
riscv64
	R-ape-5.7.1-6.fc40.riscv64.rpm (info) (download)
	R-ape-debuginfo-5.7.1-6.fc40.riscv64.rpm (info) (download)
	R-ape-debugsource-5.7.1-6.fc40.riscv64.rpm (info) (download)

Logs

riscv64
	state.log
	hw_info.log
	root.log
	build.log
	installed_pkgs.log
	mock_output.log

Changelog

* Thu Apr 25 2024 Iñaki Úcar <iucar@fedoraproject.org> - 5.7.1-6 - R-maint-sig mass rebuild * Mon Jan 22 2024 Fedora Release Engineering <releng@fedoraproject.org> - 5.7.1-5 - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild * Fri Jan 19 2024 Fedora Release Engineering <releng@fedoraproject.org> - 5.7.1-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild * Wed Jul 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 5.7.1-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild * Fri Apr 21 2023 Iñaki Úcar <iucar@fedoraproject.org> - 5.7.1-2 - R-maint-sig mass rebuild * Mon Mar 13 2023 Tom Callaway <spot@fedoraproject.org> - 5.7.1-1 - update to 5.7-1 * Sun Jan 22 2023 Elliott Sales de Andrade <quantum.analyst@gmail.com> - 5.6.2-3 - Drop support for i686 - Switch to SPDX licenses * Wed Jan 18 2023 Fedora Release Engineering <releng@fedoraproject.org> - 5.6.2-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild * Fri Sep 02 2022 Tom Callaway <spot@fedoraproject.org> - 5.6.2-1 - update to 5.6-2 - rebuild for R 4.2.1 - bootstrap on * Wed Jul 20 2022 Fedora Release Engineering <releng@fedoraproject.org> - 5.5-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild