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Information for build python-steps-3.6.0-37.fc41

ID65186
Package Namepython-steps
Links Fedora Package Sources | Fedora Official Koji Buildsystem | Rocks RISC-V Koji Buildsystem | Fedora RISC-V GitHub | Old Koji Buildsystem
Version3.6.0
Release37.fc41
Epoch
DraftFalse
Sourcegit+https://src.fedoraproject.org/rpms/python-steps.git#2a9681178c72bda4ca9d4db370d3699afe10cf24
SummarySTochastic Engine for Pathway Simulation
Description STEPS is a package for exact stochastic simulation of reaction-diffusion systems in arbitrarily complex 3D geometries. Our core simulation algorithm is an implementation of Gillespie's SSA, extended to deal with diffusion of molecules over the elements of a 3D tetrahedral mesh. While it was mainly developed for simulating detailed models of neuronal signaling pathways in dendrites and around synapses, it is a general tool and can be used for studying any biochemical pathway in which spatial gradients and morphology are thought to play a role. STEPS also supports accurate and efficient computational of local membrane potentials on tetrahedral meshes, with the addition of voltage-gated channels and currents. Tight integration between the reaction-diffusion calculations and the tetrahedral mesh potentials allows detailed coupling between molecular activity and local electrical excitability. We have implemented STEPS as a set of Python modules, which means STEPS users can use Python scripts to control all aspects of setting up the model, generating a mesh, controlling the simulation and generating and analyzing output. The core computational routines are still implemented as C/C++ extension modules for maximal speed of execution. STEPS 3.0.0 and above provide early parallel solution for stochastic spatial reaction-diffusion and electric field simulation. Documentation can be found here: http://steps.sourceforge.net/manual/manual_index.html
Built byzhangsongsong
State failed
Volume DEFAULT
StartedFri, 10 Jan 2025 21:52:47 CST
CompletedFri, 10 Jan 2025 22:18:53 CST
Taskbuild (f41, /rpms/python-steps.git:2a9681178c72bda4ca9d4db370d3699afe10cf24)
Extra{'source': {'original_url': 'git+https://src.fedoraproject.org/rpms/python-steps.git#2a9681178c72bda4ca9d4db370d3699afe10cf24'}}
Tags No tags
RPMs No RPMs
Changelog * Mon Jul 29 2024 Miroslav Suchý <msuchy@redhat.com> - 3.6.0-37 - convert GPLv2 license to SPDX * Fri Jul 19 2024 Fedora Release Engineering <releng@fedoraproject.org> - 3.6.0-36 - Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild * Sat Jun 08 2024 Python Maint <python-maint@redhat.com> - 3.6.0-35 - Rebuilt for Python 3.13 * Fri Jan 26 2024 Fedora Release Engineering <releng@fedoraproject.org> - 3.6.0-34 - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild * Mon Jan 22 2024 Fedora Release Engineering <releng@fedoraproject.org> - 3.6.0-33 - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild * Mon Oct 30 2023 Benjamin A. Beasley <code@musicinmybrain.net> - 3.6.0-32 - Rebuild for gtest 1.14.0 * Sun Oct 29 2023 Orion Poplawski <orion@nwra.com> - 3.6.0-31 - Rebuild for openmpi 5.0.0, drops C++ API * Fri Jul 21 2023 Fedora Release Engineering <releng@fedoraproject.org> - 3.6.0-30 - Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild * Tue Jun 27 2023 Python Maint <python-maint@redhat.com> - 3.6.0-29 - Rebuilt for Python 3.12 * Fri Feb 03 2023 Benjamin A. Beasley <code@musicinmybrain.net> - 3.6.0-28 - Leaf package on ix86: drop ix86 support * Tue Jan 24 2023 Benjamin A. Beasley <code@musicinmybrain.net> - 3.6.0-27 - Rebuilt for gtest 1.13.0 (fix RHBZ#2164003) - Build with C++14 instead of C++11, since gtest dropped support - Add a missing #include directive for GCC 13 * Tue Jan 24 2023 Benjamin A. Beasley <code@musicinmybrain.net> - 3.6.0-26 - Remove old easylogging++ sources from dist-git * Fri Jan 20 2023 Fedora Release Engineering <releng@fedoraproject.org> - 3.6.0-25 - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild * Thu Sep 08 2022 Benjamin A. Beasley <code@musicinmybrain.net> - 3.6.0-24 - Tidy up spec file formatting * Thu Sep 08 2022 Benjamin A. Beasley <code@musicinmybrain.net> - 3.6.0-23 - Stop numbering patches * Thu Sep 08 2022 Benjamin A. Beasley <code@musicinmybrain.net> - 3.6.0-22 - Unbundle easyloggingpp * Mon Aug 29 2022 Benjamin A. Beasley <code@musicinmybrain.net> - 3.6.0-21 - Improve treatment of bundled sundials(2) - Unbundling currently works up to linking, where there are undefined references * Mon Aug 29 2022 Benjamin A. Beasley <code@musicinmybrain.net> - 3.6.0-20 - Use more standard macros where we can * Mon Aug 29 2022 Benjamin A. Beasley <code@musicinmybrain.net> - 3.6.0-19 - Add -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF to match %%cmake * Mon Aug 29 2022 Benjamin A. Beasley <code@musicinmybrain.net> - 3.6.0-18 - Use pkgconf to set unbundled gtest flags * Mon Aug 29 2022 Benjamin A. Beasley <code@musicinmybrain.net> - 3.6.0-17 - Simplify patch application * Mon Aug 29 2022 Benjamin A. Beasley <code@musicinmybrain.net> - 3.6.0-16 - Better handle bundled easyloggingpp dependency * Thu Aug 18 2022 Benjamin A. Beasley <code@musicinmybrain.net> - 3.6.0-15 - Remove unbundled dependencies in %%prep * Thu Aug 18 2022 Benjamin A. Beasley <code@musicinmybrain.net> - 3.6.0-14 - Remove workaround for pre-flexiblas Fedora versions * Thu Aug 18 2022 Benjamin A. Beasley <code@musicinmybrain.net> - 3.6.0-13 - Reduce macro indirection in the spec file